Package index
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OLS_wrapper() - Ordinary Linear Regression wrapper with multi variable of interest and stratification
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OLS_wrapper_() - Ordinary Linear Regression with multi variable of interest
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characteristic_table_generator() - Characteristic Table Generator
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characteristic_wrapper() - Single column inspector
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clean_correlation_matrix() - Function cleaning input and computing correlation matrix
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compute_nih_ldl() - NIH 2 equation, also known as the Sampson-NIH equation
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correlation_matrix_dataframe() - Function wrapper compute pairwise correlation matrix and return as a data.frame
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correlation_matrix_plot() - Function wrapper compute pairwise correlation matrix and return as a visualization format
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create_multi_color_palette() - Create a non-white color palette for ggplot2 based on Polychrome::glasbey.colors
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distinguishable_palette() - Wrapper creating a distinguishable, non-white color palette for ggplot2 based on Polychrome::glasbey.colors
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enrichment_rank() - Distribution illustration for proteomics/lipidomics, etc
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flatten_correlation_matrix() - Function cleaning correlation matrix to pairwise dataframe
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generate_boolean_ratio_output() - Characteristics for boolean variable
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generate_continuous_IQR_output() - Characteristics for non-normality distributed variable
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generate_continuous_sd_output() - Characteristics for normality distributed variable
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generate_odd_ratio() - Compute OR from effect size in logistic regression
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inspect_distribution() - Wrapper quickly check the distribution from Shapiro-Wilk test and visualization
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linear_regression() - Ordinary Linear Regression
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logistic_regression() - Logistics Linear Regression
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logistic_wrapper() - Logistics Linear Regression wrapper with multi variable of interest and stratification
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logistic_wrapper_() - Logistics Linear Regression with multi-variable of interest
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manhattan_data_clean() - Clean format for a Manhattan plot
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manhattan_plot() - Wrapper for a Manhattan plot
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multi_line_summary() - Multi-column Summary
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multi_omics_directed_acyclic_graph() - Generate and preview a directed acyclic graph for multi-omics result
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normality_table() - Shapiro-Wilk test on each variable
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pairwise_boolean_report() - A wrapper preparing pairwise distribution comparison report for boolean(0/1) variables
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pairwise_boolean_table() - Pairwise distribution comparison report for boolean(0/1) variables
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pairwise_boolean_test() - Pairwise distribution comparison report for boolean(0/1) variable
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pairwise_t_test_report() - A wrapper preparing pairwise distribution comparison report normally distributed variables
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pairwise_t_test_table() - Pairwise distribution comparison report for normally distributed variables
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pairwise_wilcox_report() - A wrapper preparing pairwise distribution comparison report normally distributed variables
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pairwise_wilcox_table() - Pairwise distribution comparison report for non-normally distributed variables
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rms_illustration_3d() - 3d visualization for rms fit object
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trend_bar_chart() - A fill bar chart for composition over a specific variable